PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986485.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 362aa MW: 40582 Da PI: 8.4442

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986485.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167	6.4e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+kv++++l + e ik++diyk++PwdLpk ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_022986485.1 14 MLPGFRFHPTDEELVGFYLKRKVQQRPLLI-ELIKQIDIYKYDPWDLPKLGGGGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579**********************999.89***********77777999**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg+ktdW+mhe+rl XP_022986485.1 108 dGTKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEERNEGEKA EELMLPGFRF HPTDEELVGF YLKRKVQQRP LLIELIKQID IYKYDPWDLP 60 KLGGGGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV 120 FYKGRAAKGV KTDWMMHEFR LPSLTHPSPS KRLVDKTIPA NDSWAICRIF KKTNSTAQRA 180 LSLSSNIPPL SDNAFTKNDT YFPTKPTLPS FETLNQSSIS NTYPFDFVGS CKPFSTQTTN 240 TFAHLPILAE PSPNATEQEK SRVDLSSILL NMSSSVLGDF GMKPIADTID LLANQQFINN 300 YPQPFSHEMQ AGGDQFGGMM RSSVGCPLGL PLNISELGKP SFVWDSSSSC PSEVSTTTNC 360 YT

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEERNEGEKA EELMLPGFRF HPTDEELVGF YLKRKVQQRP LLIELIKQID IYKYDPWDLP  60
KLGGGGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV  120
FYKGRAAKGV KTDWMMHEFR LPSLTHPSPS KRLVDKTIPA NDSWAICRIF KKTNSTAQRA  180
LSLSSNIPPL SDNAFTKNDT YFPTKPTLPS FETLNQSSIS NTYPFDFVGS CKPFSTQTTN  240
TFAHLPILAE PSPNATEQEK SRVDLSSILL NMSSSVLGDF GMKPIADTID LLANQQFINN  300
YPQPFSHEMQ AGGDQFGGMM RSSVGCPLGL PLNISELGKP SFVWDSSSSC PSEVSTTTNC  360
YT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-101	NAC family protein