PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022986370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 229aa MW: 26291.1 Da PI: 5.9603 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEde+l +v+++G+ W+ + g++R++k+c++rw++yl XP_022986370.1 14 RGAWSFEEDEKLRAYVQRYGPSKWRELPTLAGLTRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 1e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T eE +l+ +++k++G++ W+tI ++++ gRt++++k++w+ + XP_022986370.1 67 RGNYTDEENDLICNLHKKHGNR-WSTIDAKLP-GRTDNEIKNHWNAH 111 899*******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MVRAPVVDKD GVRRGAWSFE EDEKLRAYVQ RYGPSKWREL PTLAGLTRCG KSCRLRWLNY 60 LRPGIKRGNY TDEENDLICN LHKKHGNRWS TIDAKLPGRT DNEIKNHWNA HLKKQQSSTQ 120 PKPKQLTSQV IEAKREDFTG YSSTTFGILE SSSLSQQTSS CDDNFATQNW GVEDHDRSGY 180 YEDFWTEPCV SDVLDGCLEF SADYGIGIFS PQHDASYDDN YIDLFCSLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74080.1 | 1e-48 | MYB family protein |