PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986317.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CO-like

Protein Properties

Length: 366aa MW: 40578 Da PI: 4.5404

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.1	1.2e-05	2	34	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 e+ C+ ++ ++++ +C++++ lC C H+ XP_022986317.1 2 EPQCEFCGVEKAIVYCKSDSARLCLHCDYIVHS 34 689***999**************998885 PP
2	zf-B_box	18.9	3.2e-06	47	72	5	30
zf-B_box 5 kCpeHeekelqlfCedCqqllCedCl 30 C++++ ++++l C d+++ lC+ C XP_022986317.1 47 LCDKCNAHPAILRCMDDKVSLCQGCD 72 7************************6 PP
3	CCT	63	9.2e-22	310	353	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_022986317.1 310 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAG 353 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MEPQCEFCGV EKAIVYCKSD SARLCLHCDY IVHSANSLSR RHLRSLLCDK CNAHPAILRC 60 MDDKVSLCQG CDWSADDCSS LPQRTHLLHS YTGSPSTSEF SRICTSLLDS TSCNTAFDAT 120 ADWTSLTTPY VIADSIDLTD VEAPSAAENL NDVQTCSKFE TWIADPASAS PENPSYQPDF 180 LSDDSNLPKD AETNENNDIC ESLNLGDVSL HLENGEGLFD SPKDAMKFEF DAGELECLLI 240 DRNFPVTESN VPVEDTIEVH SSISVSLSNI TGESSGADYQ ECGLSPAFLT ETSWDPSMEA 300 IGPLAKDRNR DKAKMRYNEK KKTRTFGKQI RYASRKARAD TRKRVKGRFV KAGEAYDYDP 360 LVTRNF

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MEPQCEFCGV EKAIVYCKSD SARLCLHCDY IVHSANSLSR RHLRSLLCDK CNAHPAILRC  60
MDDKVSLCQG CDWSADDCSS LPQRTHLLHS YTGSPSTSEF SRICTSLLDS TSCNTAFDAT  120
ADWTSLTTPY VIADSIDLTD VEAPSAAENL NDVQTCSKFE TWIADPASAS PENPSYQPDF  180
LSDDSNLPKD AETNENNDIC ESLNLGDVSL HLENGEGLFD SPKDAMKFEF DAGELECLLI  240
DRNFPVTESN VPVEDTIEVH SSISVSLSNI TGESSGADYQ ECGLSPAFLT ETSWDPSMEA  300
IGPLAKDRNR DKAKMRYNEK KKTRTFGKQI RYASRKARAD TRKRVKGRFV KAGEAYDYDP  360
LVTRNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	4e-78	CO-like family protein