PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022986269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 755aa MW: 82740.8 Da PI: 5.8442 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63 | 4.3e-20 | 92 | 148 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++ +++t++q++e+e++F+++++p+ ++r+eL+++l+L+ qVk+WFqN+R+++k+ XP_022986269.1 92 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKN 148 688999************************************************995 PP | |||||||
2 | START | 219.7 | 9.2e-69 | 282 | 502 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela +a++el ++a+ +ep+W++ +n+de+l++f+++ + ++ ea+r+s+vv+m++ +lve+l+d++ qW++ + +a+tl XP_022986269.1 282 ELAVAAMEELTRMAQMGEPLWMTNLdgssHVLNEDEYLRTFPRGIGpkpagFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 375 57899*******************99988899***********999********************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 ev+s+g galq+m++e+q++splvp R++++vRy++q+g+g+w++vd+S+d + p +vR++++pSg+li++++ng+skvtwvehv XP_022986269.1 376 EVLSTGvagnynGALQVMTSEFQVPSPLVPtRESYYVRYCKQHGDGKWAVVDISLDDLCPTP----GVRCRRRPSGCLIQEMPNGYSKVTWVEHV 466 ********************************************************999988....7**************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 ++++r +h+l+r+lv+sg+a+gak+wv tl+rqce+ XP_022986269.1 467 EVDDRGVHNLYRQLVSSGQAFGAKRWVTTLDRQCER 502 **********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 755 aa Download sequence |
MPAGIMTQAR NMPSMIGRNG NNVGGFVSTS GLVLSQSSMM DGQLLPLDMP QNTSKSDLAR 60 IRDDDFDSAT KSDSDNNHEL VSGDDQDPRP KKKRYHRHTQ HQIQEMEAFF KECPHPDDKQ 120 RKELSRELNL EPLQVKFWFQ NKRTQMKNQH ERHENTQLRT ENEKLRADNM RYREALSNAS 180 CPNCGGPTAI GEMSFDEHHL RLENARLREE IDRISAIAAK YVGKPVVNYP LLSPPVPSRP 240 LELGMGNFGP QPGLGGDIHA STGDLIRSIS SPIEAEKPMI IELAVAAMEE LTRMAQMGEP 300 LWMTNLDGSS HVLNEDEYLR TFPRGIGPKP AGFKCEASRE SAVVIMNHIN LVEILMDVNQ 360 WSTLFSGIVS RAMTLEVLST GVAGNYNGAL QVMTSEFQVP SPLVPTRESY YVRYCKQHGD 420 GKWAVVDISL DDLCPTPGVR CRRRPSGCLI QEMPNGYSKV TWVEHVEVDD RGVHNLYRQL 480 VSSGQAFGAK RWVTTLDRQC ERLASAMATN ISTGDVGVIT NQEGRKSMLK LAERMVISFC 540 AGVSASTTHT WTTLSGTGAD DVRVMTRKSI DDPGRPPGIV LSAATSFWLP VPPKTIFDFL 600 RDENSRNEWD ILSNGGVVQE MAHIANGHDT GNCVSLLRVN STNSSQSNML ILQESCTDPT 660 VSFVIYAPVD IVAMNVVLNG GDPDYVALLP SGFAILPDGG GGEGVSGGSL LTVAFQILVD 720 SVPTAKLSLG SVATVNNLIA CTVERIKASL SCDAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.4 | 0.0 | HD-ZIP family protein |