PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022986201.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 232aa MW: 26918.9 Da PI: 4.6407 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.4 | 3.4e-18 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l +v+++G+ +W++I++ g+ R++k+c++rw +yl XP_022986201.1 19 KGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYL 66 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.7e-16 | 72 | 116 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ +eEd+ ++++ + lG++ W++Ia +++ gRt++++k++w++ XP_022986201.1 72 RGNFQKEEDQTILRLQATLGNR-WSAIATYLP-GRTDNEIKNHWHTN 116 899*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MEEEGDERER ENGENGRKKG KWSKEEDEKL RAYVTKYGSW NWRLIPKFAG LSRCGKSCRL 60 RWMNYLRPDI KRGNFQKEED QTILRLQATL GNRWSAIATY LPGRTDNEIK NHWHTNLKKL 120 LDQNPSNTEV EDAAASSCSE LRIREEEEEL DETLIVLNSE MATPELAAKH EGMNFGETET 180 WVVGLNAEHS MEVGGNLWTD PFVFEDPLSL DNNPTHVPMD LFEHYEMFPP SN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-47 | MYB family protein |