PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986186.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family M-type_MADS
Protein Properties Length: 281aa    MW: 31763.2 Da    PI: 4.9817
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF33.65.1e-1123482449
                    HHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF 24 AeELSvLCdaevaviifsstgklyey 49
                    A ELSvLC+ae+a++++ss++kly++
  XP_022986186.1 23 AAELSVLCGAEIAILVASSSNKLYTF 48
                    99***********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MKKSLGRRKI EIKKLEKKSS QQAAELSVLC GAEIAILVAS SSNKLYTFGH PNVESLLDRF  60
LTGNSAPPKP AEAYLPLEEL NRDFDDVAAE YDFEKRRTAE RLSNDRFWWD EPLESMKIDE  120
LKRFWSSLVE LRGKVAERVE KFTATRKEGS PIPALQPSTP LSIDLVENLQ RPPTPPSIGL  180
FKSLQWPSTP PSIDLVENLE RLPTSPSIDL FENLQWPSTP PSIDLVENLQ RPQTPPSIDL  240
VESLQWSPMP LIHLAENDQC LPSSFQISGN HSVARRLNML D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.17e-18M-type_MADS family protein