PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022986071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 323aa MW: 37164.2 Da PI: 4.5948 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.4 | 1e-15 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l++ ++ +G ++W++ ++ g+ R++k+c++rw +yl XP_022986071.1 16 RGPWSPAEDLRLINFIQNYGHDNWRALPKQAGLLRCGKSCRLRWINYL 63 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.9e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+e +++++k +G++ W++Ia++++ gRt++++k+ w+++l XP_022986071.1 69 RGNFTQDEEETIIKLHKTWGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MGKGRAPCCD KNQVKRGPWS PAEDLRLINF IQNYGHDNWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTQDEEETI IKLHKTWGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLLN 120 TATTKDCNEP KESLTTSSSS SSSLRLSNET QDLETEQPNK TNYVTSDLFC PEQQTTSSLS 180 SNPSNSNSSS QVDKVWPQNH LDFGEEVEKK KENKQIRSEL ELELELESIE IPLEWDKDFW 240 NILDLEDIDL FGSNEVDQYY CQASNFGEEK RQEFENDKWF KYLENELGLE ADGCSGADDV 300 TAAERLLMDD VDPCMAYFAD GLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 3e-76 | MYB family protein |