PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022985859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 353aa MW: 40344.3 Da PI: 5.2865 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.7 | 6.5e-55 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yL +k++g+++el e+i+e+d+yk+ePw+Lp k + + + ewyf+s+rd+ky++g+r+nrat+ gyWkatgkd+ v XP_022985859.1 6 LPPGFRFHPTDEELVAYYLDRKINGRSIEL-EIIPEIDLYKCEPWELPdKsLLPSIDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRVVQ 99 79****************************.99**************95444455678**********************************999 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+ykgrap+g +t+Wvmheyrl XP_022985859.1 100 S-QKRVVGMKKTLVYYKGRAPHGIRTNWVMHEYRL 133 9.999****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MAPMTLPPGF RFHPTDEELV AYYLDRKING RSIELEIIPE IDLYKCEPWE LPDKSLLPSI 60 DMEWYFYSPR DRKYPNGSRT NRATRGGYWK ATGKDRVVQS QKRVVGMKKT LVYYKGRAPH 120 GIRTNWVMHE YRLLHSQHAT AASCSSTKDS YALCRVFKKT TQIPKPVREK ASGVDVKAPL 180 WQMGDEQDMQ VDESGGAESL RGGIESNEDG DSFDHLLHEY NPKIFSSENS SSDLTQGNVA 240 DDLPAPVASD NEANSAANNL YPIHIECPSN FIQIPSNLHY QHPYYPPLEL EDFPQLNIMG 300 ETKTWMKVEC MDEYVKFDKF RESMNGSLEE ILSACSVPMQ EDHNVQQYSS LLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54330.1 | 1e-103 | NAC family protein |