PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985835.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 608aa MW: 67152.1 Da PI: 6.8392

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.9	2.9e-14	180	239	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_022985835.1 180 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 239 57*****************666664477446******99***********98 PP
2	AP2	46.9	6.8e-15	284	333	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022985835.1 284 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 333 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MGSMNSNNWL SFPLSPTNPS LPPHLQTPTH AHHFSLGNLE NDNMDIPFQT HEWNLISGQG 60 GGEVPKVADF LGVSKAENEA DLIGFNQIHE ANDTDYLFPI TRLVPLQQHP TPAAAPINMD 120 STTNYDPQDN SNSLQSLTLS MGSGKPSTCE TSSTPDSANN NTTLDVTPRR TLDTFGQRTS 180 IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQVYLGGY DKEDKAARAY DLAALKYWGT 240 STTTNFPISN YEKEVEEMKH MTRQEFVASI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI 300 GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF DMSRYDVKSI LESNTLPIGG 360 GAAKRLKEAQ AIESSRKRDE MIALGSSSSF QYGSSSSSSN SSNHRLQQQQ PSYPLLQQPN 420 LNMDHHHHHH HHLQTQPFLS LQNHHDISQY TNDPSSFHHS STYMHTQLQL HHHQSDNSPY 480 PNNNNNNNHQ FYGGAGGGYL HNHPGLLHGM INMGGGGGSN LESSNNNNNA LSSANHYENP 540 NNNSNGGYLG NAFGMGSTSA TANNGAPAEE YALVKVDYDM PPNAGGYGSW SGDSVQGSNP 600 GVFSMWND

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MGSMNSNNWL SFPLSPTNPS LPPHLQTPTH AHHFSLGNLE NDNMDIPFQT HEWNLISGQG  60
GGEVPKVADF LGVSKAENEA DLIGFNQIHE ANDTDYLFPI TRLVPLQQHP TPAAAPINMD  120
STTNYDPQDN SNSLQSLTLS MGSGKPSTCE TSSTPDSANN NTTLDVTPRR TLDTFGQRTS  180
IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQVYLGGY DKEDKAARAY DLAALKYWGT  240
STTTNFPISN YEKEVEEMKH MTRQEFVASI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI  300
GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF DMSRYDVKSI LESNTLPIGG  360
GAAKRLKEAQ AIESSRKRDE MIALGSSSSF QYGSSSSSSN SSNHRLQQQQ PSYPLLQQPN  420
LNMDHHHHHH HHLQTQPFLS LQNHHDISQY TNDPSSFHHS STYMHTQLQL HHHQSDNSPY  480
PNNNNNNNHQ FYGGAGGGYL HNHPGLLHGM INMGGGGGSN LESSNNNNNA LSSANHYENP  540
NNNSNGGYLG NAFGMGSTSA TANNGAPAEE YALVKVDYDM PPNAGGYGSW SGDSVQGSNP  600
GVFSMWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein