PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022985826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33298.3 Da PI: 7.5682 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44 | 5e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l + G g+W+ +ar g+ R++k+c++rw +yl XP_022985826.1 16 KGLWSPEEDDKLMTYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 63 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.7e-16 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k++w++ XP_022985826.1 69 RGAFSPQEERLIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 112 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MRKPDPAAAR TTKLRKGLWS PEEDDKLMTY MLNNGQGCWS DVARNAGLQR CGKSCRLRWI 60 NYLHPDLKRG AFSPQEERLI IHLHSLLGNR WSQIAARLPG RTDNEIKNFW NSTIKKRLKN 120 LSSTSSPNTS SAGSPSDNSK SIPFGGLLST QDYQQQQQQG LIDYPIYASH PSPSIIALDP 180 FPTFTAEAEQ GFFLEHDSFF NNLPVLQRVN TTTVVTTATT AATTLVKEAN HGNYLISNIN 240 CLANHNNNTN NNPKMENING GVGPNFVHEE FSIGEWDLED LMKDVPSCFP YLNFQVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 8e-71 | MYB family protein |