PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022985507.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 223aa MW: 24561.8 Da PI: 9.5685 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 4e-19 | 97 | 147 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++++eIrdp + g +r++lg++ tae+Aa a+++a+ +++g XP_022985507.1 97 RYRGVRRRP-WGKYASEIRDPAKSG--ARVWLGTYETAEDAALAYDQAAFRMRG 147 8********.**********96654..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MELQKPDPFG DPNLVHNKTP LTYAYLFSSL TDQWGDLPLK LDDSHDMVIF NSLHDAVVFV 60 LSPLHSIHPP DASSALHLDP FPTTTTPAAQ MGDKSKRYRG VRRRPWGKYA SEIRDPAKSG 120 ARVWLGTYET AEDAALAYDQ AAFRMRGSKA LLNFPNRIGS DDPPPLRVSA RRREHDILVP 180 LADGSAKRRK GAANIKAEPE SSKSQVGPSQ MAALPVGEKL LVN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 171 | 190 | RRREHDILVPLADGSAKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 4e-46 | ERF family protein |