PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985335.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 409aa MW: 45896.2 Da PI: 7.7869

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.2	1.7e-49	45	170	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ XP_022985335.1 45 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTED 138 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_022985335.1 139 LRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 170 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MAIAAAASSS SSSTMSHEVS STKNNNSNSN SNSSEHDQHE HDVVMPGFRF HPTEEELVEF 60 YLRRKVEGKR FNVELITFLD LYRYDPWELP ALAAIGEKEW FFYVPRDRKY RNGDRPNRVT 120 TSGYWKATGA DRMIRTEDLR SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PHHETERYQK 180 AEISLCRVYK RAGVEDHHPS LPRSLTSRAS LSRMKTSSTS TSKNLLPGGS VYVIPTSSPT 240 NFELQFHNRQ LQIGTGVETT TVAVADVSAT SSCEEVTTVL GLSKQNPFPT TPLINMAAGS 300 STPPNSLEEN DHQSNILQKQ QQPSSSYPSF FTPSSNNSLD DLQNLINYQQ QPPLSTSPAA 360 IVNSLPPPQY YQPTPPPPPQ QLALNTLPVA FSDRLWEWNP IQDATNPFK

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MAIAAAASSS SSSTMSHEVS STKNNNSNSN SNSSEHDQHE HDVVMPGFRF HPTEEELVEF  60
YLRRKVEGKR FNVELITFLD LYRYDPWELP ALAAIGEKEW FFYVPRDRKY RNGDRPNRVT  120
TSGYWKATGA DRMIRTEDLR SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PHHETERYQK  180
AEISLCRVYK RAGVEDHHPS LPRSLTSRAS LSRMKTSSTS TSKNLLPGGS VYVIPTSSPT  240
NFELQFHNRQ LQIGTGVETT TVAVADVSAT SSCEEVTTVL GLSKQNPFPT TPLINMAAGS  300
STPPNSLEEN DHQSNILQKQ QQPSSSYPSF FTPSSNNSLD DLQNLINYQQ QPPLSTSPAA  360
IVNSLPPPQY YQPTPPPPPQ QLALNTLPVA FSDRLWEWNP IQDATNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-111	NAC family protein