PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985296.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 870aa MW: 96142.9 Da PI: 6.1251

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.6	2.9e-29	465	516	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022985296.1 465 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 516 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MAQALRYIKE SSDQHVLAQV WAPVKSGGKL VLSTSGQPFV LDSQSNGLHQ YRMASLTFMF 60 SLEPDQDGYL GLPGRVFQQK LPEWTPNVQY YSSKEYPRLS HALHYNVQGT LALPVFDPSG 120 QSCLGVLELI MTSPKINYAP EVDKVCKALE AVNLKSSEIL DHPNNQIHTS QCFSNQICNE 180 GRQNALAEIL EVLTVVCETH NLPLAQTWVP CRHRNVLAYG GGLKKSCTSF DGSCMGRICM 240 SATEVASYVV DAHMWGFRDA CLEHHLRKGQ GVSGRAFLSH SSCFCGDITQ FSKTEYPLVH 300 YALMFGLKSC FSICLRSTFT GDDEYILEFF LPPSIVDYQE QKTLLGALMA TMKQHFYTLK 360 VASGINLKDE EGLVEIIQVS RNGGFESRIE YIQIPRPMEL PPHSDAMPNA GEVVALEKLQ 420 QQSLMVHDTP KDENNSARDD ENHNPAPCPQ SKEVKKTSER KRGKAEKSIS LEVLQQYFAG 480 SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL SKLKRVIESV QGAEGAFGIS 540 SLATSPLPVT VSSSSHPLTP EVSNQQNFVA SQPSDPQHKE TNTSEGQTID TWARLEDQLH 600 RGVLSPEEPI HEQNGYLPKF GNGLSNYRTG SGSREESVGT PTSHGSCQGS PANDSGVANN 660 PISIPLQQEQ CVRRESPEVV FHPIDKLNIS APARPIPDTL VMVEPTEEAF GGMLIADAGS 720 SKDLRNLCAS VADAVLDEQV PEFCWSNPPD IALRQPMDSV CHTVPYMSAG QEARRMTIKA 780 SYKEDIIRFR IPLSSGIVEL REEVAKRLKM EVGTFDIKYM DDDREWVLMA CDADLQECVE 840 ISKSSGSNII RLLVHDLSVN LGSSCESTGE

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MAQALRYIKE SSDQHVLAQV WAPVKSGGKL VLSTSGQPFV LDSQSNGLHQ YRMASLTFMF  60
SLEPDQDGYL GLPGRVFQQK LPEWTPNVQY YSSKEYPRLS HALHYNVQGT LALPVFDPSG  120
QSCLGVLELI MTSPKINYAP EVDKVCKALE AVNLKSSEIL DHPNNQIHTS QCFSNQICNE  180
GRQNALAEIL EVLTVVCETH NLPLAQTWVP CRHRNVLAYG GGLKKSCTSF DGSCMGRICM  240
SATEVASYVV DAHMWGFRDA CLEHHLRKGQ GVSGRAFLSH SSCFCGDITQ FSKTEYPLVH  300
YALMFGLKSC FSICLRSTFT GDDEYILEFF LPPSIVDYQE QKTLLGALMA TMKQHFYTLK  360
VASGINLKDE EGLVEIIQVS RNGGFESRIE YIQIPRPMEL PPHSDAMPNA GEVVALEKLQ  420
QQSLMVHDTP KDENNSARDD ENHNPAPCPQ SKEVKKTSER KRGKAEKSIS LEVLQQYFAG  480
SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL SKLKRVIESV QGAEGAFGIS  540
SLATSPLPVT VSSSSHPLTP EVSNQQNFVA SQPSDPQHKE TNTSEGQTID TWARLEDQLH  600
RGVLSPEEPI HEQNGYLPKF GNGLSNYRTG SGSREESVGT PTSHGSCQGS PANDSGVANN  660
PISIPLQQEQ CVRRESPEVV FHPIDKLNIS APARPIPDTL VMVEPTEEAF GGMLIADAGS  720
SKDLRNLCAS VADAVLDEQV PEFCWSNPPD IALRQPMDSV CHTVPYMSAG QEARRMTIKA  780
SYKEDIIRFR IPLSSGIVEL REEVAKRLKM EVGTFDIKYM DDDREWVLMA CDADLQECVE  840
ISKSSGSNII RLLVHDLSVN LGSSCESTGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein