PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022985211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 308aa MW: 36086.4 Da PI: 5.8841 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.4 | 9.1e-56 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ a +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_022985211.1 7 VPPGFRFHPTDEELVDYYLRKKISSRRIDL-DVIKDVDLYKIEPWDLQEicNLGAeDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKTI 100 69****************************.9***************954533332566************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLv+ykgrap+g+k+dW+mheyrle XP_022985211.1 101 YS-KHDLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 136 **.8899****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MNTFLDVPPG FRFHPTDEEL VDYYLRKKIS SRRIDLDVIK DVDLYKIEPW DLQEICNLGA 60 EDQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKTI YSKHDLIGMR KTLVYYKGRA 120 PNGQKSDWIM HEYRLETDEN GAPQQEGWVV CRVFKKRIAT VNRRMNEHES PCWYDEPVAI 180 MPDLDSPSFP QHLSNYFPCK KEMDLTNYQP QQHFLHLPLL ESQKLVQSAS NYQPSPPKQQ 240 LSDQSLLFLF DDNNNNNEQT ADQLTDWRVF DKYVASQLSQ ENASKQELIV PENAPTSTSS 300 SCQIELWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 2e-98 | NAC family protein |