PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 349aa MW: 39171.6 Da PI: 8.3868 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.8 | 4.2e-53 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+r++ky++g r+nra++sgyWkatg+dk+vl++ XP_022984946.1 15 LPPGFRFHPTDEELVVHYLKKKANSVPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRERKYPKGARPNRAATSGYWKATGTDKPVLAS 108 79****************************.88***************988899****************************************9 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_022984946.1 109 ggSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 143 877788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MESTDSSAGP QQPNLPPGFR FHPTDEELVV HYLKKKANSV PLPVAIIAEV DLYKFDPWEL 60 PAKATFGEQE WYFFSPRERK YPKGARPNRA ATSGYWKATG TDKPVLASGG SNQKVGVKKA 120 LVFYGGKPPK GIKTNWIMHE YRLADNKPSI NRPPGYDLAN KKNSLKLDDW VLCRIYKKNN 180 SHRGMDQERE DSMDEIMIGS IPQSLRLNDE YPKLGFNYAT FLHQNDQNLL QGIVGANNND 240 GGLTNSKRLP SSLFWTQQQE QEQQDQDHSD ISSNKRLHFE NTTDGASTSV TTTHSTDNNP 300 QNSTSSFATL LNNLPQTPPL HHHAHTVLGS IGDGLFRSTY QVPGANWYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-108 | NAC family protein |