PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 257aa MW: 29518.6 Da PI: 6.5253 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.5 | 5.6e-19 | 38 | 92 | 3 | 56 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++f++eq++ Le+ F++ +++++ +++ +LA++lgL+ rq+ +WFqNrR ++k XP_022984932.1 38 NKRRFSDEQIRSLESIFYSsDSKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWK 92 5679**************98**********************************9 PP | |||||||
2 | HD-ZIP_I/II | 110.9 | 8.4e-36 | 38 | 130 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE+ F +++ kL++++Kv+la+eLglqprq+a+WFqnrR R+k+k++E+++++L+++yd+l+++ ++L++e+++L ++l++ XP_022984932.1 38 NKRRFSDEQIRSLESIFYSSDsKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWKSKEMENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQK 130 79***************88777********************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MERQEYFILP NFETAAVASS QICSTPRRRR KKKTNNTNKR RFSDEQIRSL ESIFYSSDSK 60 LDSRKKVQLA TELGLQPRQI AIWFQNRRVR WKSKEMENNF RSLRANYDNL ASQFKTLQEE 120 KNSLLSQLQK LSELVQEGPR EGHYSNEIAK TIYETKEKPQ SFHDELGQSG VTYLSNNYNT 180 DKRGTENGEG DRGLEMTHSS EGISNDISHA VEQACQLLNP NGSFESSENW CGFDSDGGGI 240 IFECQPCSSL QELSFWG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 33 | RRRRKKK |
2 | 27 | 41 | RRRRKKKTNNTNKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.2 | 2e-31 | HD-ZIP family protein |