PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984931.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 271aa    MW: 31328.7 Da    PI: 6.6772
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.2e-1952106356
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++++f++eq++ Le+ F++ +++++ +++ +LA++lgL+ rq+ +WFqNrR ++k
  XP_022984931.1  52 NKRRFSDEQIRSLESIFYSsDSKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWK 106
                     5679**************98**********************************9 PP
2HD-ZIP_I/II110.89.4e-3652144293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krr+s+eq+++LE+ F +++ kL++++Kv+la+eLglqprq+a+WFqnrR R+k+k++E+++++L+++yd+l+++ ++L++e+++L ++l++
  XP_022984931.1  52 NKRRFSDEQIRSLESIFYSSDsKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWKSKEMENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQK 144
                     79***************88777********************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDWKKPHENE WTKVMERQEY FILPNFETAA VASSQICSTP RRRRKKKTNN TNKRRFSDEQ  60
IRSLESIFYS SDSKLDSRKK VQLATELGLQ PRQIAIWFQN RRVRWKSKEM ENNFRSLRAN  120
YDNLASQFKT LQEEKNSLLS QLQKLSELVQ EGPREGHYSN EIAKTIYETK EKPQSFHDEL  180
GQSGVTYLSN NYNTDKRGTE NGEGDRGLEM THSSEGISND ISHAVEQACQ LLNPNGSFES  240
SENWCGFDSD GGGIIFECQP CSSLQELSFW G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14147RRRRKKK
24155RRRRKKKTNNTNKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.22e-31HD-ZIP family protein