PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984919.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 333aa    MW: 37458.5 Da    PI: 5.9122
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.54.7e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_022984919.1  5 KQKWTNEEEAALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGAPKQKWTN EEEAALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LALKRLHAPK KDENILARSV AVQSEDELPE AKSVSLSSDI KLIAGPKRSN  120
VRKEEEEEEE DDDDEEEETE AERTERDARY DCHRWEKRLD NLIIEAITTL REPGGSNKTK  180
ITSYIEDQYW APPDFKRLLS SKLKFLTASG KLVKVKRKYR LPPVMPSSER RSSMLFLDDQ  240
QRASLRADKD EMCILAKAQI DLELAKMRTM TSQEAAAAAA HAVAEAEAAI AEAEEAAREA  300
EAAEADAEAA QSFAEAAMKT LKGRNLPKMM IRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.18e-86MYB_related family protein