PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984866.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 458aa MW: 50448.9 Da PI: 6.7222

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.8	1.5e-14	177	236	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_022984866.1 177 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEDKAARAYDLAALKYWG 236 57*****************666664478446******99***********98 PP
2	AP2	50.4	5.6e-16	279	330	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022984866.1 279 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 330 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MAPPPPTNWL SFSLSPIEML RSTDSPFLPY EPPSTASPHY LLDTFYSNNG WSGSANSHHS 60 HEPKLEDFLG DSSPMMRYSD SQTETQDSSL THIYDHAYFG DQQDFKTIAA FQAFSGNSGS 120 EVDDSVSITR TQIAAAETPT GALSLSVVQS SDTASAVVAV DSDSSKKIAD TFGQRTSIYR 180 GVTRHRWTGR YEAHLWDNSC RREGQARKGR QVYLGGYDKE DKAARAYDLA ALKYWGPTAT 240 TNFPVSNYAK ELDEMKHVTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV 300 AGNKDLYLGT FATEEEAAEA YDIAAIKFRG LNAVTNFEMS RYDVEAIAKS ALPIGGAAKR 360 LKLCLETEQK PILNHDQAIQ CSNGNNNMNL GTAIQAVPVP SIPCGIPYDT AAMLYHHNYY 420 HLQPNAIGSS ESTSPSIAAP VSLGPQAAEF FVWPHQSY

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MAPPPPTNWL SFSLSPIEML RSTDSPFLPY EPPSTASPHY LLDTFYSNNG WSGSANSHHS  60
HEPKLEDFLG DSSPMMRYSD SQTETQDSSL THIYDHAYFG DQQDFKTIAA FQAFSGNSGS  120
EVDDSVSITR TQIAAAETPT GALSLSVVQS SDTASAVVAV DSDSSKKIAD TFGQRTSIYR  180
GVTRHRWTGR YEAHLWDNSC RREGQARKGR QVYLGGYDKE DKAARAYDLA ALKYWGPTAT  240
TNFPVSNYAK ELDEMKHVTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV  300
AGNKDLYLGT FATEEEAAEA YDIAAIKFRG LNAVTNFEMS RYDVEAIAKS ALPIGGAAKR  360
LKLCLETEQK PILNHDQAIQ CSNGNNNMNL GTAIQAVPVP SIPCGIPYDT AAMLYHHNYY  420
HLQPNAIGSS ESTSPSIAAP VSLGPQAAEF FVWPHQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-169	AP2 family protein