PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | SRS | ||||||||
Protein Properties | Length: 254aa MW: 27096 Da PI: 7.0312 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 102.1 | 1e-31 | 73 | 136 | 4 | 67 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa 67 + +sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrer ++ sk+ +++ XP_022984770.1 73 KVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLISTTGGDSKRPRDT 136 5589*********************************************888877776666555 PP | |||||||
2 | DUF702 | 80.4 | 4.9e-25 | 137 | 200 | 94 | 155 |
DUF702 94 aeskkeletsslPeevsseavfrcvrvssvdd..geeelaYqtavsigGhvfkGiLydqGleek 155 + +++ +e+ ++P+e++s+avfrcvr++++d+ g +++aYqtav+igGh+fkGiL+d+G++++ XP_022984770.1 137 HATSSGFEIGNFPAEINSTAVFRCVRMTTLDEptGTDQYAYQTAVNIGGHIFKGILHDHGPDQQ 200 45667889999*********************9899*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MAGFFPLGGG GGGSSGGEII HPTDGLLWYK NYESFETEQQ QQGGERFGYS GENSPARSSL 60 VMVRSGGDGG GGKVISCQDC GNQAKKDCVH MRCRTCCKSR GFLCETHVKS TWVPASKRRE 120 RLISTTGGDS KRPRDTHATS SGFEIGNFPA EINSTAVFRC VRMTTLDEPT GTDQYAYQTA 180 VNIGGHIFKG ILHDHGPDQQ QHHHNPPISA SPDGGALLIT TADSAALLDP PPSYPAPLSS 240 YITAGTQFFQ PPTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 2e-49 | SRS family protein |