PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28391.7 Da PI: 9.9285 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.4 | 8e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA ELS+LCda+v +iifsstgkly+yss XP_022984684.1 10 RIDNSTSRQVTFSKRRSGLLKKARELSILCDADVGLIIFSSTGKLYDYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 81.3 | 2.2e-27 | 81 | 171 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++ + +++e+a Lk++++ +q+ +R+l+Ge+L+ Ls+k+Lq+Le+qLe slk +R kK+++l e+i +l++k +++++en +L kkl+ XP_022984684.1 81 NPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQKGNQMHQENLELYKKLD 171 566789*********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KARELSILCD ADVGLIIFSS TGKLYDYSSS 60 SIRSITDRYN KMKEEQNQLM NPVSELQFWK REAAGLKQQL HYMQECHRQL MGEELSGLSV 120 KDLQNLESQL EMSLKGVRVK KEKILSEEIT QLRQKGNQMH QENLELYKKL DMIRKENAEL 180 QMKYQVYGPM EVDKTSSSTV HQFTFANRYG MPAPVHLQLR QPQPQNNETS IPGIKLGYVL 240 ANCVMT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 6e-90 | MIKC_MADS family protein |