PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984643.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 764aa MW: 84425.9 Da PI: 6.2149 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.1 | 9.4e-21 | 75 | 129 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k +++t++q++eLe +F+++++p+ ++r eL+++l L+++qVk+WFqNrR+++k XP_022984643.1 75 KKYHRHTPHQIQELEIFFKECPHPDDKQRSELSRRLCLETKQVKFWFQNRRTQMK 129 68899***********************************************999 PP | |||||||
2 | START | 176.5 | 1.6e-55 | 281 | 502 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 +a++a++elv +a+ ++p+W +s+ e +n de+ ++f++s + ++ea r+s++v+ ++ lve+l+d + +W e+++ +a+t+ XP_022984643.1 281 FALAAMNELVEMAQTDAPLWIRSRdggsrETLNLDEYSRTFPSSAGmkhinWTTEATRDSTMVIINSLALVETLMDAN-RWAEMFPcliaRATTI 374 5789*************************************99998**9999**************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 +vi+sg galqlm+ael +lsplvp R f+R++rql +g w++vdvS+ + ++ ++ + +++lpSg+++e+++ng skvtwveh+ XP_022984643.1 375 DVITSGmcgtrnGALQLMNAELRVLSPLVPvRTLKFLRFCRQLADGLWAVVDVSIGEGSDSNT---FLGCRRLPSGCVVEDMPNGFSKVTWVEHT 466 ************************************************************875...99999************************ PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 ++++ ++h+l+r+l++sg+ +g ++w+a lqrqce+ XP_022984643.1 467 EYDETVIHQLYRQLISSGIGFGSQRWLANLQRQCEC 502 **********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 764 aa Download sequence |
MPIPSSIPSS SEFSTSTRKM DGYGEVCLLG DGFDPSGAVR MREDEYDSRS GSDNIDGALS 60 GDDQDANDEQ QPKGKKYHRH TPHQIQELEI FFKECPHPDD KQRSELSRRL CLETKQVKFW 120 FQNRRTQMKT QIERHENAIL KQENDKLRAE NSVMKDAIAN PTCNTCGGPS IPGHLSFEEH 180 HLRIENARLR EKLHRLYTVT NKFLGWPVSS PFGNQGSSPS SDSCLELSVG RSGIGRSSTV 240 SDSMGLGNGH FGAGPVMPIS KPEIGVSGND IPLDRTIYVD FALAAMNELV EMAQTDAPLW 300 IRSRDGGSRE TLNLDEYSRT FPSSAGMKHI NWTTEATRDS TMVIINSLAL VETLMDANRW 360 AEMFPCLIAR ATTIDVITSG MCGTRNGALQ LMNAELRVLS PLVPVRTLKF LRFCRQLADG 420 LWAVVDVSIG EGSDSNTFLG CRRLPSGCVV EDMPNGFSKV TWVEHTEYDE TVIHQLYRQL 480 ISSGIGFGSQ RWLANLQRQC ECLAILMSST IPTEDPAGIS PGGRRSMLKL SQRMVDKFCS 540 GLCSSSLHKW DKLVVGNISE DVKVMARKSI NEPGEPPGIV LSAATSVWMP VTQQRLFAFL 600 QDDHFRSEWD ILSNSRPMLE MVRISKGQDA DNRVSLLRAN PMKANESTMF ILQETWTDIS 660 GSLVVYTPVD TASVSLMMRG GDSAYVSLLP SGFAILPNAT NNDKDASMKS GMNSGHDNGC 720 LLTVAFQILV NSLPTAKLTV ESVETVNNLI FCTIRKIKTA LQVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |