PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984384.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 422aa MW: 47046.4 Da PI: 6.7416

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.2	2.2e-30	195	254	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_022984384.1 195 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 254 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MEIDLSLKID QEHEHEQEQA AVSDSRKGLA VDINGGEISA LQMEMDRMKE ENKALRRAVE 60 QTMKDYYDLE TKIGIIQQNN LTNKDSRSFV LFQGNEKKRH DIQNLDLDLE EMSKKKRRAR 120 SPPSKEEETK ERELGLSLGL HTNNNDMEED NHRELQEETR EKNKPQRPEL LQGMAPPQNR 180 KTRVSVRARC ESATMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVAPGCPVR KQVQRCLEDM 240 SILITTYEGT HNHPLPVGAT AMASTASAAA SFMLLDSANT NPNILNSSSY SPNPNEPSAN 300 RFYSPLMATS STSDLPHSFF HRNFQPNHLM GSLHGRSWNP TDGNKPPLTA ESVSAIASDP 360 KFRVAVAAAI STLINKESNR TTSMLDPIER SSFDSGKDGD GGDDGGGGNK NWVVESLSLN 420 GK

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MEIDLSLKID QEHEHEQEQA AVSDSRKGLA VDINGGEISA LQMEMDRMKE ENKALRRAVE  60
QTMKDYYDLE TKIGIIQQNN LTNKDSRSFV LFQGNEKKRH DIQNLDLDLE EMSKKKRRAR  120
SPPSKEEETK ERELGLSLGL HTNNNDMEED NHRELQEETR EKNKPQRPEL LQGMAPPQNR  180
KTRVSVRARC ESATMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVAPGCPVR KQVQRCLEDM  240
SILITTYEGT HNHPLPVGAT AMASTASAAA SFMLLDSANT NPNILNSSSY SPNPNEPSAN  300
RFYSPLMATS STSDLPHSFF HRNFQPNHLM GSLHGRSWNP TDGNKPPLTA ESVSAIASDP  360
KFRVAVAAAI STLINKESNR TTSMLDPIER SSFDSGKDGD GGDDGGGGNK NWVVESLSLN  420
GK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	118	KKRHDIQNLDLDLEEMSKKKRR
2	114	118	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	9e-69	WRKY family protein