PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984302.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 272aa    MW: 30616.6 Da    PI: 6.6783
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.89.4e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +lv  ++++G g+W++ +   g++R++k+c++rw +yl
   XP_022984302.1 15 RGPWTHEEDHKLVSFITKHGYGSWRSLPVLAGLNRCGKSCRLRWTNYL 62
                     89********************************************97 PP
2Myb_DNA-binding53.74.7e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++++E+++++d++  lG++ W+ Ia++++ gRt++++k++w+++l
   XP_022984302.1  68 RGKFSQQEQQIILDLHSILGNK-WSVIASHLP-GRTDNEIKNFWNTHL 113
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGRSPPSSNQ IGLKRGPWTH EEDHKLVSFI TKHGYGSWRS LPVLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSQQEQQIIL DLHSILGNKW SVIASHLPGR TDNEIKNFWN THLKKRLIKM  120
GFDPVTHMPA IYDNTLSAHH LPPPNLENFL LFDLPTLKQQ LEALQMTTLQ EYLQLPQLPP  180
PPFTPTFHLQ YDRNMSGPYA NLPDLEIFGA SDDPTWTAVS GGQSGASMWV SSSSSNAPSP  240
LPPVEANSES ESAPLTDELM FNDYSLFSDI DP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65230.11e-72MYB family protein