PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984252.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-PHD

Protein Properties

Length: 871aa MW: 96700.8 Da PI: 4.635

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5.1e-14	697	748	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++ le+L + F++n+yp ++++e LA++lgL+ +qV WF N R + XP_022984252.1 697 RRLSQLALERLLASFQENQYPERATKESLAQELGLSVKQVNKWFTNTRWSTR 748 6789999*****************************************8766 PP
2	PHD	36.6	1e-12	332	387	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ e++++lCdg C++ fH+ Cl+++l ++++p + wlC+ C++k XP_022984252.1 332 FCAKCGSkeLSLENDIILCDGiCDRGFHQFCLEPPLLNTDIPLDdeGWLCPGCDCK 387 6999965556****88*************9998888*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 871 aa Download sequence
MEERDECTES RSNNNAEAVQ EAKTCVEAEM PTCLSNEQKH ELEATPGYTN KTGGPDEEKP 60 EVQQNMEEEN KELGSGDVLS ELSEKHNQTF SNLADNDQVE AGNLLCCDKD TENLIVPIEV 120 ETTTLLVDCS ELPPEVVNKN YIEQMNPPIE ELTQNTPFQK LETVPSNSEQ SDHKDKRILK 180 SMKINSILRS LVSSDRNMRS KTQEKDKDPE PSNDLNNFTA EEGKGKKKER NIQGKGARVD 240 EFSSIRNHLR YLLNRINYEQ NLIEAYSSEG WKGFSSDKLK PEKELQRASN EIMRRKLKIR 300 DVFQRIDALC GEGGLSKSLF DSQGQIASED IFCAKCGSKE LSLENDIILC DGICDRGFHQ 360 FCLEPPLLNT DIPLDDEGWL CPGCDCKDDC LNLLNEFQGS RLSITDGWEK VYPEAAASAA 420 GRNFDHALGL PSDDSEDDDY DPDVPDTIVQ DDKSSSETSG YASASEELES SPNVDQYLGL 480 PSDDSEDDDY DPSAPERDED VRQESSSSDF TSDSEDLAAL DSNPSSKADN LVSSSLNNTT 540 SMKNPDGRSS GGGPRKSSLY NELSSLLESG PDKDGPEPVL GRRQVERLDY KKLHDETYGN 600 VPTDSSDDTY ASISMDSSDD QGWDSNTRKR SPKTLVLALP NYRPNDDLTN VKTKHSSKRG 660 TRQKAAAVNM NKSVTKTPED TGKASSSVRR TTSSSYRRLS QLALERLLAS FQENQYPERA 720 TKESLAQELG LSVKQVNKWF TNTRWSTRHP SSVEGNKAKS SSRMGIHSSQ ASGELHQPEK 780 EFGAQHQELP TADSVVAPCQ SGDTGDVKLA TQDTKRSEFS AAKSRKRKGR SDHAASRSKD 840 SKESQRPPAK SPKVNEIQTA HSIKTRRRNS L

Sequence ? help Back to Top

Protein Sequence Length: 871 aa Download sequence

MEERDECTES RSNNNAEAVQ EAKTCVEAEM PTCLSNEQKH ELEATPGYTN KTGGPDEEKP  60
EVQQNMEEEN KELGSGDVLS ELSEKHNQTF SNLADNDQVE AGNLLCCDKD TENLIVPIEV  120
ETTTLLVDCS ELPPEVVNKN YIEQMNPPIE ELTQNTPFQK LETVPSNSEQ SDHKDKRILK  180
SMKINSILRS LVSSDRNMRS KTQEKDKDPE PSNDLNNFTA EEGKGKKKER NIQGKGARVD  240
EFSSIRNHLR YLLNRINYEQ NLIEAYSSEG WKGFSSDKLK PEKELQRASN EIMRRKLKIR  300
DVFQRIDALC GEGGLSKSLF DSQGQIASED IFCAKCGSKE LSLENDIILC DGICDRGFHQ  360
FCLEPPLLNT DIPLDDEGWL CPGCDCKDDC LNLLNEFQGS RLSITDGWEK VYPEAAASAA  420
GRNFDHALGL PSDDSEDDDY DPDVPDTIVQ DDKSSSETSG YASASEELES SPNVDQYLGL  480
PSDDSEDDDY DPSAPERDED VRQESSSSDF TSDSEDLAAL DSNPSSKADN LVSSSLNNTT  540
SMKNPDGRSS GGGPRKSSLY NELSSLLESG PDKDGPEPVL GRRQVERLDY KKLHDETYGN  600
VPTDSSDDTY ASISMDSSDD QGWDSNTRKR SPKTLVLALP NYRPNDDLTN VKTKHSSKRG  660
TRQKAAAVNM NKSVTKTPED TGKASSSVRR TTSSSYRRLS QLALERLLAS FQENQYPERA  720
TKESLAQELG LSVKQVNKWF TNTRWSTRHP SSVEGNKAKS SSRMGIHSSQ ASGELHQPEK  780
EFGAQHQELP TADSVVAPCQ SGDTGDVKLA TQDTKRSEFS AAKSRKRKGR SDHAASRSKD  840
SKESQRPPAK SPKVNEIQTA HSIKTRRRNS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	1e-92	HB-PHD family protein