PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HB-PHD | ||||||||
Protein Properties | Length: 871aa MW: 96700.8 Da PI: 4.635 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 43.6 | 5.1e-14 | 697 | 748 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++ le+L + F++n+yp ++++e LA++lgL+ +qV WF N R + XP_022984251.1 697 RRLSQLALERLLASFQENQYPERATKESLAQELGLSVKQVNKWFTNTRWSTR 748 6789999*****************************************8766 PP | |||||||
2 | PHD | 36.6 | 1e-12 | 332 | 387 | 1 | 51 |
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ e++++lCdg C++ fH+ Cl+++l ++++p + wlC+ C++k XP_022984251.1 332 FCAKCGSkeLSLENDIILCDGiCDRGFHQFCLEPPLLNTDIPLDdeGWLCPGCDCK 387 6999**965556********88*****************9998888*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 871 aa Download sequence |
MEERDECTES RSNNNAEAVQ EAKTCVEAEM PTCLSNEQKH ELEATPGYTN KTGGPDEEKP 60 EVQQNMEEEN KELGSGDVLS ELSEKHNQTF SNLADNDQVE AGNLLCCDKD TENLIVPIEV 120 ETTTLLVDCS ELPPEVVNKN YIEQMNPPIE ELTQNTPFQK LETVPSNSEQ SDHKDKRILK 180 SMKINSILRS LVSSDRNMRS KTQEKDKDPE PSNDLNNFTA EEGKGKKKER NIQGKGARVD 240 EFSSIRNHLR YLLNRINYEQ NLIEAYSSEG WKGFSSDKLK PEKELQRASN EIMRRKLKIR 300 DVFQRIDALC GEGGLSKSLF DSQGQIASED IFCAKCGSKE LSLENDIILC DGICDRGFHQ 360 FCLEPPLLNT DIPLDDEGWL CPGCDCKDDC LNLLNEFQGS RLSITDGWEK VYPEAAASAA 420 GRNFDHALGL PSDDSEDDDY DPDVPDTIVQ DDKSSSETSG YASASEELES SPNVDQYLGL 480 PSDDSEDDDY DPSAPERDED VRQESSSSDF TSDSEDLAAL DSNPSSKADN LVSSSLNNTT 540 SMKNPDGRSS GGGPRKSSLY NELSSLLESG PDKDGPEPVL GRRQVERLDY KKLHDETYGN 600 VPTDSSDDTY ASISMDSSDD QGWDSNTRKR SPKTLVLALP NYRPNDDLTN VKTKHSSKRG 660 TRQKAAAVNM NKSVTKTPED TGKASSSVRR TTSSSYRRLS QLALERLLAS FQENQYPERA 720 TKESLAQELG LSVKQVNKWF TNTRWSTRHP SSVEGNKAKS SSRMGIHSSQ ASGELHQPEK 780 EFGAQHQELP TADSVVAPCQ SGDTGDVKLA TQDTKRSEFS AAKSRKRKGR SDHAASRSKD 840 SKESQRPPAK SPKVNEIQTA HSIKTRRRNS L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 1e-92 | HB-PHD family protein |