PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 762aa MW: 85295.8 Da PI: 7.5113 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60 | 3.7e-19 | 79 | 134 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ ++++++q+++Le++F+ +++p++++r++L+++lgL+++q+k+WFqN+R++ k XP_022984100.1 79 KKTYHRHNPYQIQQLESFFRACPHPDENQRRQLSRELGLETKQIKFWFQNKRTQTK 134 688999***********************************************988 PP | |||||||
2 | START | 145.9 | 3.8e-46 | 278 | 498 | 3 | 206 |
HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS START 3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 a +a++el+++ +ep+W+k +n+d + ++f++ + ++e ++asgvv+m +++lv +ld +W ++ aet XP_022984100.1 278 AATALEELIRLLRIDEPLWMKILndgrGVLNRDSYEKIFPRPNHfkssnARTESSKASGVVTMSAMQLVDAFLDAD-KWADLFPtviiNAETFHI 371 67899******************999999**********98776899999**************************.99999999999******* PP ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS START 85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172 i++g galqlm++++ splv+ Rdf f+R+++q + g+wvivdvS + ++ + ++R+ +lpSg++i++++ng skvtwvehv++ XP_022984100.1 372 IDPGmpgnrsGALQLMYQQMHIFSPLVSpRDFCFLRHCQQIEHGVWVIVDVSYEFLKDCVT---SARCWRLPSGCMIQEMPNGCSKVTWVEHVEV 463 *************************9999**************************999885...9****************************** PP -SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 173 kgrlp.hwllrslvksglaegaktwvatlqrqcek 206 ++++ h l+r lv +++a ga +wv tlqr ce+ XP_022984100.1 464 DDKTQtHRLYRDLVFNTTAYGAERWVFTLQRMCER 498 **9998***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 762 aa Download sequence |
MLCILFILSV IFNVVYKRVQ AALLKVFAAP VCGNFKFYFF RLVDISYWLV RMDFMMEGRG 60 SYGGGSGDEQ EASNDRKGKK TYHRHNPYQI QQLESFFRAC PHPDENQRRQ LSRELGLETK 120 QIKFWFQNKR TQTKTQNERA DNSSLRTENE KIQCENLAIR EALRNVICPS CGGPPFGEEE 180 RQRNLHKLRL ENAHLKEEHE KVSNLLAKYI GKPISQLESL LPVLGSSLDL SPRSSLTQIV 240 LSPAVNLMSD PVILDRTATP YQSRGINDLE NALMMETAAT ALEELIRLLR IDEPLWMKIL 300 NDGRGVLNRD SYEKIFPRPN HFKSSNARTE SSKASGVVTM SAMQLVDAFL DADKWADLFP 360 TVIINAETFH IIDPGMPGNR SGALQLMYQQ MHIFSPLVSP RDFCFLRHCQ QIEHGVWVIV 420 DVSYEFLKDC VTSARCWRLP SGCMIQEMPN GCSKVTWVEH VEVDDKTQTH RLYRDLVFNT 480 TAYGAERWVF TLQRMCERLA YTFRDCAPSH ELGGVLTSNE GRRSIMKLSH RMVKNFCGVL 540 SMSGKLDFPQ LSEVNNSGVR ISVRISSELG QPSGTIVSAA TSLWLPLQPE SIFNFFKDEK 600 ARVQWDVLSN GSPVHEIAHI LTGVHPGNSI LIIRQPFVPT ENNMLILQES CIDPLGSLVI 660 YAPIDMPAMN IATSGQDPSE ILILPSGFVI TGDGRSHSGV GASTSATSGR PSGSLLTVAF 720 QILVSSVSSS KQLNVESVAT VNTLISATVQ RIKAALNCSG LD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 0.0 | HD-ZIP family protein |