PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984099.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 762aa    MW: 85295.8 Da    PI: 7.5113
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox603.7e-1979134156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ ++++++q+++Le++F+ +++p++++r++L+++lgL+++q+k+WFqN+R++ k
  XP_022984099.1  79 KKTYHRHNPYQIQQLESFFRACPHPDENQRRQLSRELGLETKQIKFWFQNKRTQTK 134
                     688999***********************************************988 PP

2START145.93.8e-462784983206
                     HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
           START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                     a +a++el+++   +ep+W+k        +n+d + ++f++ +       ++e ++asgvv+m +++lv  +ld   +W   ++     aet   
  XP_022984099.1 278 AATALEELIRLLRIDEPLWMKILndgrGVLNRDSYEKIFPRPNHfkssnARTESSKASGVVTMSAMQLVDAFLDAD-KWADLFPtviiNAETFHI 371
                     67899******************999999**********98776899999**************************.99999999999******* PP

                     ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
           START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                     i++g      galqlm++++   splv+ Rdf f+R+++q + g+wvivdvS +  ++  +   ++R+ +lpSg++i++++ng skvtwvehv++
  XP_022984099.1 372 IDPGmpgnrsGALQLMYQQMHIFSPLVSpRDFCFLRHCQQIEHGVWVIVDVSYEFLKDCVT---SARCWRLPSGCMIQEMPNGCSKVTWVEHVEV 463
                     *************************9999**************************999885...9****************************** PP

                     -SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 173 kgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     ++++  h l+r lv +++a ga +wv tlqr ce+
  XP_022984099.1 464 DDKTQtHRLYRDLVFNTTAYGAERWVFTLQRMCER 498
                     **9998***************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 762 aa     Download sequence    
MLCILFILSV IFNVVYKRVQ AALLKVFAAP VCGNFKFYFF RLVDISYWLV RMDFMMEGRG  60
SYGGGSGDEQ EASNDRKGKK TYHRHNPYQI QQLESFFRAC PHPDENQRRQ LSRELGLETK  120
QIKFWFQNKR TQTKTQNERA DNSSLRTENE KIQCENLAIR EALRNVICPS CGGPPFGEEE  180
RQRNLHKLRL ENAHLKEEHE KVSNLLAKYI GKPISQLESL LPVLGSSLDL SPRSSLTQIV  240
LSPAVNLMSD PVILDRTATP YQSRGINDLE NALMMETAAT ALEELIRLLR IDEPLWMKIL  300
NDGRGVLNRD SYEKIFPRPN HFKSSNARTE SSKASGVVTM SAMQLVDAFL DADKWADLFP  360
TVIINAETFH IIDPGMPGNR SGALQLMYQQ MHIFSPLVSP RDFCFLRHCQ QIEHGVWVIV  420
DVSYEFLKDC VTSARCWRLP SGCMIQEMPN GCSKVTWVEH VEVDDKTQTH RLYRDLVFNT  480
TAYGAERWVF TLQRMCERLA YTFRDCAPSH ELGGVLTSNE GRRSIMKLSH RMVKNFCGVL  540
SMSGKLDFPQ LSEVNNSGVR ISVRISSELG QPSGTIVSAA TSLWLPLQPE SIFNFFKDEK  600
ARVQWDVLSN GSPVHEIAHI LTGVHPGNSI LIIRQPFVPT ENNMLILQES CIDPLGSLVI  660
YAPIDMPAMN IATSGQDPSE ILILPSGFVI TGDGRSHSGV GASTSATSGR PSGSLLTVAF  720
QILVSSVSSS KQLNVESVAT VNTLISATVQ RIKAALNCSG LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein