PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022984011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 29926 Da PI: 8.0912 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44 | 5.1e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+++++ g+ R++k+c++rw +yl XP_022984011.1 14 RGPWTVEEDHKLMNFILNNGIHCWRLVPKLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.2e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++ XP_022984011.1 67 RGAFTEIEENQIIHLHSLLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGRQPCCDKV GLKRGPWTVE EDHKLMNFIL NNGIHCWRLV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGAF TEIEENQIIH LHSLLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKRLKQLG 120 LDPSTHKRLG DKTDRLKEKL FIASNPLREQ EAMSNLDFET KEINQVAAHT ISGGSSNLVC 180 KGIGYEMWTG QLETNSHASF SLEHCSSMNE SLSIMKQNSV QFDSLDSLPS WDDGIPKFNQ 240 LEEDDIYSLG NSGGYFVDTF SH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 2e-83 | MYB family protein |