PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984009.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 354aa MW: 40136.9 Da PI: 7.8311

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.4	8e-14	106	153	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+++++ g+ R++k+c++rw +yl XP_022984009.1 106 RGPWTVEEDHKLMNFILNNGIHCWRLVPKLAGLLRCGKSCRLRWINYL 153 89****************************99**********97 PP
2	Myb_DNA-binding	51.8	1.8e-16	159	202	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++ XP_022984009.1 159 RGAFTEIEENQIIHLHSLLGNR-WSKIAAHFP-GRTDNEIKNHWNT 202 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MVKKKKNGVA KESMMFFSKE MVNVITFPSA GMIIKREREN GDGRSCLTFS ETIMDVEECA 60 KKLDCRMGFP SGNDIILSDP SCLLCCAYSS IDMGRQPCCD KVGLKRGPWT VEEDHKLMNF 120 ILNNGIHCWR LVPKLAGLLR CGKSCRLRWI NYLRPDLKRG AFTEIEENQI IHLHSLLGNR 180 WSKIAAHFPG RTDNEIKNHW NTRIKKRLKQ LGLDPSTHKR LGDKTDRLKE KLFIASNPLR 240 EQEAMSNLDF ETKEINQVAA HTISGGSSNL VCKGIGYEMW TGQLETNSHA SFSLEHCSSM 300 NESLSIMKQN SVQFDSLDSL PSWDDGIPKF NQLEEDDIYS LGNSGGYFVD TFSH

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MVKKKKNGVA KESMMFFSKE MVNVITFPSA GMIIKREREN GDGRSCLTFS ETIMDVEECA  60
KKLDCRMGFP SGNDIILSDP SCLLCCAYSS IDMGRQPCCD KVGLKRGPWT VEEDHKLMNF  120
ILNNGIHCWR LVPKLAGLLR CGKSCRLRWI NYLRPDLKRG AFTEIEENQI IHLHSLLGNR  180
WSKIAAHFPG RTDNEIKNHW NTRIKKRLKQ LGLDPSTHKR LGDKTDRLKE KLFIASNPLR  240
EQEAMSNLDF ETKEINQVAA HTISGGSSNL VCKGIGYEMW TGQLETNSHA SFSLEHCSSM  300
NESLSIMKQN SVQFDSLDSL PSWDDGIPKF NQLEEDDIYS LGNSGGYFVD TFSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	1e-82	MYB family protein