PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022983998.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 320aa    MW: 36196.6 Da    PI: 5.8107
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022983998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.2e-152067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
   XP_022983998.1 20 KGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCRLRWINYL 67
                     678*******************************************97 PP
2Myb_DNA-binding50.83.8e-1673117147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E+el+v+++ + G++ W+ Ia++++ gRt++++k++w++ 
   XP_022983998.1  73 RGAFSPQEEELIVHLHSLIGNR-WSQIASRLP-GRTDNEIKNFWNST 117
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MRKPEVVPGK ENAEKNKYRK GLWSPEEDEK LMRYMLNNGQ GCWSDIARNA GLQRCGKSCR  60
LRWINYLRPD LKRGAFSPQE EELIVHLHSL IGNRWSQIAS RLPGRTDNEI KNFWNSTLKK  120
RLKNNLSSSP YSHESSDPRF DMMYGGIMAM QEHDIMSMNI SMDSSSTSSS SSQLPFSATG  180
HSSFDGSSMA FVDNNFQMAS VAEATNGFLQ APGGGGCLTE MGMRMEERFR YGGLEGERSM  240
EIEREVVCGP HEEMMNHPPL MNNKSSFGQY LGTNEQNLNV EEMFGDMGSH GHLQDSLKMG  300
SNEWDLESFM QDISSLPHFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.13e-71MYB family protein