PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022983871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 215aa MW: 24354.4 Da PI: 10.217 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++q+G g+W+t + + g+ R++k+c++rw +yl XP_022983871.1 14 KGPWTPEEDHKLLAYIQQHGHGSWRTLPPKAGLERCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.7 | 4.7e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ E++ +v+++++lG++ W++Ia +++ +Rt++++k++w++++ XP_022983871.1 67 RGKFSLHEEQAIVQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHM 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MGTSPRRHKS GLKKGPWTPE EDHKLLAYIQ QHGHGSWRTL PPKAGLERCG KSCRLRWTNY 60 LRPDIKRGKF SLHEEQAIVQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HMKKKLIKMG 120 IDPITHKPIK NNEEQNNMNS TLTHMAQWET ARLEAEERLA RQSKPQPIPS ANQNPYGSSG 180 GEESPTTSST AAGGDHLPSS DSKNNWWDAI LGGEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 1e-83 | MYB family protein |