PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983797.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 393aa MW: 44818 Da PI: 7.9344

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48	3.2e-15	66	125	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g XP_022983797.1 66 SRFRGVSRHRWTGRFEAHLWDkLSWNMtqkKKgKQVYLGAYDEEESAARAYDLAALKYWG 125 789****************888865666447**********************987 PP
2	AP2	56.8	5.6e-18	168	219	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++gt eeAa+a++ a+ +++g XP_022983797.1 168 SKYRGVARHHHNGRWEARIGRVYG---NKYLYLGTYGTQEEAARAYDMAAIEYRG 219 89**99*******99654...4***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MEAPALVLKN EENLRICWTG GQAQAIRRVK RRRREPASAA TDQTNKQQCV KQQSDQAPTT 60 TMKRSSRFRG VSRHRWTGRF EAHLWDKLSW NMTQKKKGKQ VYLGAYDEEE SAARAYDLAA 120 LKYWGVTTIT NFPVSEYEKE IETMQTMTKE EYLASLRRKS SGFSRGVSKY RGVARHHHNG 180 RWEARIGRVY GNKYLYLGTY GTQEEAARAY DMAAIEYRGI NAVTNFDWSN YMAWLKPPPV 240 PPAALNDAHM TSNPDKELSN SRSIPVEETS LFENNHYDID LFHSLQKQEL LESCSTPING 300 YAKSSSPSAL DLLLRSSFFK KLVETNSNLS VDDADNGEET KTHGQLNSAF DEFGDVFGDR 360 LTDEPFVCSS NKDLQESELH SYFSGMFHCF KAA

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MEAPALVLKN EENLRICWTG GQAQAIRRVK RRRREPASAA TDQTNKQQCV KQQSDQAPTT  60
TMKRSSRFRG VSRHRWTGRF EAHLWDKLSW NMTQKKKGKQ VYLGAYDEEE SAARAYDLAA  120
LKYWGVTTIT NFPVSEYEKE IETMQTMTKE EYLASLRRKS SGFSRGVSKY RGVARHHHNG  180
RWEARIGRVY GNKYLYLGTY GTQEEAARAY DMAAIEYRGI NAVTNFDWSN YMAWLKPPPV  240
PPAALNDAHM TSNPDKELSN SRSIPVEETS LFENNHYDID LFHSLQKQEL LESCSTPING  300
YAKSSSPSAL DLLLRSSFFK KLVETNSNLS VDDADNGEET KTHGQLNSAF DEFGDVFGDR  360
LTDEPFVCSS NKDLQESELH SYFSGMFHCF KAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	35	RRVKRRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-95	AP2 family protein