PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983584.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 532aa MW: 57769.4 Da PI: 5.6244

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	345	387	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L XP_022983584.1 345 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 387 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MLPKSTGILW LDGDHHDGAS WNRTNNHNND DIAVAGSASS FKSMLQSDWY MNSTTPLNPS 60 NQDFHSLSSH PDVRNLPFNS NPPDNLLLRP IDSSSACSAS QAFSLDPSHS QSMLPPQKSC 120 FPSLFNVACS SNFENGFDLG GENGLLGSYQ GNQVSNSSAM MGFNGISSLP QIGNQELSLN 180 NAEFPVADNP PAFGAGFNPT DAFESFDGCG NALFQNRSKA LRPPESFPQV GGTQPTLFQK 240 RAAHRVGSSG ADKLENLEVS GSKFGDGSMW MPNMERLMKN SDEDIEDDSL DISHLNYDSD 300 EANEYNKLED NVNAKNSGSN SNANTTVAGG NQKGKRKGMP AKNLMAERRR RKKLNDRLYM 360 LRSVVPKISK MDRASILGDA IDYLKELLQK INELHNELES TPPPPPGSSL QPPASFHPST 420 PTLPNLPCRV KDELCPSSMS SPKAQPARVE VRAREGRAVN IHMFCSRKPG LLLSTMKALD 480 NLGLDVQQAV VSCFNGFALD VFRAEQSKEG EEISPEQIKA VLLDSAGLHG VV

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MLPKSTGILW LDGDHHDGAS WNRTNNHNND DIAVAGSASS FKSMLQSDWY MNSTTPLNPS  60
NQDFHSLSSH PDVRNLPFNS NPPDNLLLRP IDSSSACSAS QAFSLDPSHS QSMLPPQKSC  120
FPSLFNVACS SNFENGFDLG GENGLLGSYQ GNQVSNSSAM MGFNGISSLP QIGNQELSLN  180
NAEFPVADNP PAFGAGFNPT DAFESFDGCG NALFQNRSKA LRPPESFPQV GGTQPTLFQK  240
RAAHRVGSSG ADKLENLEVS GSKFGDGSMW MPNMERLMKN SDEDIEDDSL DISHLNYDSD  300
EANEYNKLED NVNAKNSGSN SNANTTVAGG NQKGKRKGMP AKNLMAERRR RKKLNDRLYM  360
LRSVVPKISK MDRASILGDA IDYLKELLQK INELHNELES TPPPPPGSSL QPPASFHPST  420
PTLPNLPCRV KDELCPSSMS SPKAQPARVE VRAREGRAVN IHMFCSRKPG LLLSTMKALD  480
NLGLDVQQAV VSCFNGFALD VFRAEQSKEG EEISPEQIKA VLLDSAGLHG VV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	353	KRKGMPAKNLMAERRRRKK
2	347	354	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-115	bHLH family protein