PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983505.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 469aa MW: 51655.3 Da PI: 6.8344

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.5	5.8e-17	160	209	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022983505.1 160 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 209 78*****************......55**********************997 PP
2	AP2	43	1.1e-13	252	302	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a++k +g XP_022983505.1 252 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAALKCNG 302 89******.7**5553..2.26******99********99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MAFAERGASN PMLDLNLQVV SSDSVEMVTE RLFQFPPIRM ESAGSFNGDL SASTTGDEDS 60 SSNADEAFPF AFGKDCAVQE NLAAKSLCIS DNHRDQTMEL FPLTGGLSSG SSSQKQWLEV 120 SPPEFHCWSG APERRITAPP AQQQHQPMRK NRRGPRSRSS QYRGVTFYRR TGRWESHIWD 180 CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFNVSD YDEDIKQMIN FTKEEFVHIL 240 RRHSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKYIYL GLFDSEIEAA RAYDKAALKC 300 NGKEAVTNFE PSSYVAEMAS EAAGTAENNQ ILDLNLGIAP PNLCEAQSES IAMFERRAMP 360 ENSVSAAIRS SHSQPYSFAV PSNYHSPWSV SNSSFFPNSR ERATEMRMGV GSWEWQIHGH 420 PSGTTSVPLF SAAASSGFPS SSSSSSTAIP SASSGVGETH FPAIFYCRS

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MAFAERGASN PMLDLNLQVV SSDSVEMVTE RLFQFPPIRM ESAGSFNGDL SASTTGDEDS  60
SSNADEAFPF AFGKDCAVQE NLAAKSLCIS DNHRDQTMEL FPLTGGLSSG SSSQKQWLEV  120
SPPEFHCWSG APERRITAPP AQQQHQPMRK NRRGPRSRSS QYRGVTFYRR TGRWESHIWD  180
CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFNVSD YDEDIKQMIN FTKEEFVHIL  240
RRHSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKYIYL GLFDSEIEAA RAYDKAALKC  300
NGKEAVTNFE PSSYVAEMAS EAAGTAENNQ ILDLNLGIAP PNLCEAQSES IAMFERRAMP  360
ENSVSAAIRS SHSQPYSFAV PSNYHSPWSV SNSSFFPNSR ERATEMRMGV GSWEWQIHGH  420
PSGTTSVPLF SAAASSGFPS SSSSSSTAIP SASSGVGETH FPAIFYCRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	3e-98	AP2 family protein