PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983504.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 503aa MW: 55447.7 Da PI: 6.7002

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	160	209	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022983504.1 160 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 209 78*****************......55**********************997 PP
2	AP2	42.9	1.2e-13	286	336	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a++k +g XP_022983504.1 286 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAALKCNG 336 89******.7**5553..2.26******99********99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MAFAERGASN PMLDLNLQVV SSDSVEMVTE RLFQFPPIRM ESAGSFNGDL SASTTGDEDS 60 SSNADEAFPF AFGKDCAVQE NLAAKSLCIS DNHRDQTMEL FPLTGGLSSG SSSQKQWLEV 120 SPPEFHCWSG APERRITAPP AQQQHQPMRK NRRGPRSRSS QYRGVTFYRR TGRWESHIWD 180 CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFNVSD YDEDIKQVGL AKLILITVRT 240 SNSFSNAIDE ELYSWLPLMS QMINFTKEEF VHILRRHSTG FSRGSSKYRG VTLHKCGRWE 300 ARMGQFLGKK YIYLGLFDSE IEAARAYDKA ALKCNGKEAV TNFEPSSYVA EMASEAAGTA 360 ENNQILDLNL GIAPPNLCEA QSESIAMFER RAMPENSVSA AIRSSHSQPY SFAVPSNYHS 420 PWSVSNSSFF PNSRERATEM RMGVGSWEWQ IHGHPSGTTS VPLFSAAASS GFPSSSSSSS 480 TAIPSASSGV GETHFPAIFY CRS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MAFAERGASN PMLDLNLQVV SSDSVEMVTE RLFQFPPIRM ESAGSFNGDL SASTTGDEDS  60
SSNADEAFPF AFGKDCAVQE NLAAKSLCIS DNHRDQTMEL FPLTGGLSSG SSSQKQWLEV  120
SPPEFHCWSG APERRITAPP AQQQHQPMRK NRRGPRSRSS QYRGVTFYRR TGRWESHIWD  180
CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFNVSD YDEDIKQVGL AKLILITVRT  240
SNSFSNAIDE ELYSWLPLMS QMINFTKEEF VHILRRHSTG FSRGSSKYRG VTLHKCGRWE  300
ARMGQFLGKK YIYLGLFDSE IEAARAYDKA ALKCNGKEAV TNFEPSSYVA EMASEAAGTA  360
ENNQILDLNL GIAPPNLCEA QSESIAMFER RAMPENSVSA AIRSSHSQPY SFAVPSNYHS  420
PWSVSNSSFF PNSRERATEM RMGVGSWEWQ IHGHPSGTTS VPLFSAAASS GFPSSSSSSS  480
TAIPSASSGV GETHFPAIFY CRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	3e-91	AP2 family protein