PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022983076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 216aa MW: 24926.4 Da PI: 12.185 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.2e-16 | 53 | 98 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+ +G+ +W++Ia+ + gR++k+c++rw++ XP_022983076.1 53 RGHWRPAEDAKLKELVAHYGPQNWNLIAENLR-GRSGKSCRLRWFNQ 98 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 105 | 148 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++ +eE+e+lv a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022983076.1 105 RTAFNEEEEERLVTAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 148 67899*****************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MNLPPFNHAF PGNGLLQNPA LMPPLPPPLP SSDGTAIVTK NNAPRRHTKL CARGHWRPAE 60 DAKLKELVAH YGPQNWNLIA ENLRGRSGKS CRLRWFNQLD PRINRTAFNE EEEERLVTAH 120 RLYGNKWAMI ARLFPGRTDN AVKNHWHVIM ARKQRRSLRK IFQKNNVSGE STISSTVSTS 180 AASTAWGRYG EKQRRRWRRS SQGTLSRTRM FRRRSQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 193 | 199 | QRRRWRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69560.1 | 3e-65 | MYB family protein |