PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022982985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 383aa MW: 40905.7 Da PI: 8.7827 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 138.7 | 1.6e-43 | 82 | 157 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls++k y++rhkvC++hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_022982985.1 82 RCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 157 6*************************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 383 aa Download sequence |
MEMDCSSLTE SGGSSTSSPP NSSAESLNGL KFGHKIYFED VGIGELPKSG GGGSFSSSPL 60 IASTPTKKLR GGGVVQPAQP PRCQVEGCKV DLSDVKAYYS RHKVCTMHSK SPKVIVAGLE 120 QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG ALLSTRYENS SRVGSFLMDF 180 SAYPKLTGKD VWSSSGMKAS SERVPGNQGI TSMGKYIPNP WQSNPSELLL PVSSGGTSYS 240 GPGNPSGECI NGVTDSSCAL SLLSNQTWGS RNRTTPLEVN AALLNAEGAL VAQTTSAHAA 300 TNHFPMSMSM SSWSFKGNEA PASISLDLAS DLGLNHQVSQ ALTTSSFSGD VQFPNQGSRR 360 PYMELGQSAG AFDSTQQHLH WSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42200.1 | 5e-55 | SBP family protein |