PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022982952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRF | ||||||||
Protein Properties | Length: 434aa MW: 47143.4 Da PI: 8.1404 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 81.7 | 6.5e-26 | 163 | 207 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ XP_022982952.1 163 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVET 207 79****************************************996 PP | |||||||
2 | QLQ | 42.6 | 1.8e-15 | 92 | 127 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +F+ aQ ++L+ Q+l+++y++a++ vPpeLl +i+k XP_022982952.1 92 YFSVAQRHELELQALIFRYMLAGVAVPPELLHPIKK 127 79********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence |
MDFDLKKCRR QAESEKEEEV EEPQHSAKIC KFFVEQPHRL QQQQPQPSSC SSVLPLFVPG 60 SINDSKASNM LSAFPDSTSS SSSHRLPRTL GYFSVAQRHE LELQALIFRY MLAGVAVPPE 120 LLHPIKKSLL SSTAPLFLHH PLQHFPHYPT LLQAGYWGRA AMDPEPGRCR RTDGKKWRCS 180 RDVVAGQKYC ERHMHRGRNR SRKPVETTTT KPTYTTTTTT TAAAVSSGGG SLCSNANRVV 240 GGGGGRPFST VESGKYSCVC GQTPSVDLLH LNQGASSDSL PENKNFYESQ KEASAGDGKS 300 DGHILRHFFD DWPRSENGDC GSDNSNASQR MNPTSLSISV AGNPPSSSSD VSLKLSTGGG 360 SDQGSGDPHL HQNGNIDGEH MHLNWAAGWA ATQMASMGGP LAEALRSANK NSLPTTVLHQ 420 LQRTTNSEAN FIST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52910.1 | 7e-56 | GRF family protein |