PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982905.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 522aa MW: 59210.2 Da PI: 6.7638

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92	6e-29	111	196	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+++r++++++++++++k+plW+evs+ m +e+ ++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_022982905.1 111 RWPRQETLTLLDIRSRLDSKFKEANQKGPLWDEVSRIMaEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKNYRFFRQLEA 196 8***********************************889*************************97..66678*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MEMDDQYALS DLRHLMTTPP SRSHFPSSSS IPHHDLFSSS STSSSAAAFR HHLHHHHHTP 60 YDLIMMMPRD PLPDFRSDSA ATPPAVVSAP TAPTAFELET ASLAADCATP RWPRQETLTL 120 LDIRSRLDSK FKEANQKGPL WDEVSRIMAE EHNYQRSGKK CREKFENLYK YYKKTKEGKA 180 GRQDGKNYRF FRQLEALYGE TTNSAQLPDS HFVGDSNLSF QQNGTNNPTT ALPMSYETQQ 240 KHYCDSLSLS NTSEFETSAS SDDNDDLGSV GIMDNDSVEK RRKRRGGKCW KAKIKQFIDS 300 QMRKLIDKQE AWLEKLMKTL EQKEKDRMIR EEEWRRQEVS RMDRERSFWA KERAWIEARD 360 AALMEALQRL TGRELRDYNS SPDHGLIAPE RHRNNSDNQN EDGSEILNNN TGRELVDNNN 420 YQRKTIDEGN KKRKENSRSA TTYNLYFQTD SSLYSGGGPC GGGAEIKEQS PNSSNAGGGG 480 GGGGSHVVQD SCFRFLMGEG DQSQSGLWEN FGLKLNNGSD QS

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MEMDDQYALS DLRHLMTTPP SRSHFPSSSS IPHHDLFSSS STSSSAAAFR HHLHHHHHTP  60
YDLIMMMPRD PLPDFRSDSA ATPPAVVSAP TAPTAFELET ASLAADCATP RWPRQETLTL  120
LDIRSRLDSK FKEANQKGPL WDEVSRIMAE EHNYQRSGKK CREKFENLYK YYKKTKEGKA  180
GRQDGKNYRF FRQLEALYGE TTNSAQLPDS HFVGDSNLSF QQNGTNNPTT ALPMSYETQQ  240
KHYCDSLSLS NTSEFETSAS SDDNDDLGSV GIMDNDSVEK RRKRRGGKCW KAKIKQFIDS  300
QMRKLIDKQE AWLEKLMKTL EQKEKDRMIR EEEWRRQEVS RMDRERSFWA KERAWIEARD  360
AALMEALQRL TGRELRDYNS SPDHGLIAPE RHRNNSDNQN EDGSEILNNN TGRELVDNNN  420
YQRKTIDEGN KKRKENSRSA TTYNLYFQTD SSLYSGGGPC GGGAEIKEQS PNSSNAGGGG  480
GGGGSHVVQD SCFRFLMGEG DQSQSGLWEN FGLKLNNGSD QS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	308	KRRKRRGGKCWKAKIKQFIDSQMRKLIDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	4e-99	Trihelix family protein