PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022982706.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 214aa MW: 24892.1 Da PI: 6.3776 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.5 | 6.5e-20 | 56 | 110 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+ q++ Le++F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_022982706.1 56 KKRKLTAAQVHLLETHFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKN 110 45699************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 117.1 | 1e-37 | 56 | 147 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+l++ qv+lLE++F +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+ +++++ e++rLe++ +L+e+l+e XP_022982706.1 56 KKRKLTAAQVHLLETHFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSE 147 9****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MNQQESEEHE AVQICELYTP LYIQMVPQQQ DNNLGEAKRR RRRKKNRGSE ADAVAKKRKL 60 TAAQVHLLET HFGSEHKLES ERKDRLASEL GLDPRQVAVW FQNRRARWKN KKLEEEYSSL 120 KKLHESVVVE KCRLETQILK LKEQLSEVEK EKERQTMGER GDGPLSSSSP SPSMSMDAVD 180 PTGLEEFGAS FEDVFYYMPE NSCIYGMEWP NPYI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 43 | KRRRRR |
2 | 38 | 44 | KRRRRRK |
3 | 38 | 59 | KRRRRRKKNRGSEADAVAKKRK |
4 | 39 | 45 | KRRRRRK |
5 | 39 | 60 | KRRRRRKKNRGSEADAVAKKRK |
6 | 40 | 61 | KRRRRRKKNRGSEADAVAKKRK |
7 | 41 | 62 | KRRRRRKKNRGSEADAVAKKRK |
8 | 42 | 63 | KRRRRRKKNRGSEADAVAKKRK |
9 | 43 | 64 | KRRRRRKKNRGSEADAVAKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 4e-45 | HD-ZIP family protein |