PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022982417.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 181aa MW: 20594.6 Da PI: 9.0796 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.2 | 6.6e-19 | 76 | 130 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +ftkeq Lee F+++++ s ++++eLA++l+L rqV vWFqNrRa+ k XP_022982417.1 76 RKKLRFTKEQSANLEESFKEHSTFSPKQKQELARNLKLRARQVEVWFQNRRARTK 130 78999************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 113.5 | 1.3e-36 | 76 | 164 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+r++keq++ LEesF+e+++ +p++K+elar+L+l++rqv+vWFqnrRARtk+kq+E+d+e +k+++++lkee++rL+ke +eL+ + XP_022982417.1 76 RKKLRFTKEQSANLEESFKEHSTFSPKQKQELARNLKLRARQVEVWFQNRRARTKLKQTEMDCELMKKCCEKLKEETTRLQKELQELK-S 164 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MAGVKKKKQQ VLKFDDIIMP SLSLGLSIVV ESPNEFIQLS SSGSPVSSFS NSSGYKRERD 60 GCGGEEAEED EDGSPRKKLR FTKEQSANLE ESFKEHSTFS PKQKQELARN LKLRARQVEV 120 WFQNRRARTK LKQTEMDCEL MKKCCEKLKE ETTRLQKELQ ELKSLKLTAP PFATLTVCPS 180 C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 133 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22800.1 | 1e-28 | HD-ZIP family protein |