PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982397.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 274aa MW: 30702.9 Da PI: 8.9739

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.8e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+ +g +W + ++++g++R++k+c++rw++yl XP_022982397.1 14 KGPWSPEEDAKLKSYIEQHSTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.5	2.7e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022982397.1 69 GDFSEEEDRIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QHSTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGD FSEEEDRIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGK 120 QQLMRRGRKI KSEIGNSMAI AFDNHLYNNQ SPFLPELTSA LNSPPPPPPC ANYQSLQFPS 180 NSQQLFGHTP GGDLSRTDGF QFGTDGVPGL PIPSRHVGEL EKVVYSNTAS FDNGNVLMNE 240 LDWGEMSSLI SAPLYPSMAH DLMMGSSFLE QQKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-82	MYB family protein