PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982361.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 444aa MW: 50855.1 Da PI: 9.5824

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51	3.6e-16	157	216	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022982361.1 157 SQYRGVSRHRWTGRYEAHLWDkSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 216 78*****************988886678446***********************98 PP
2	AP2	51.9	1.9e-16	259	310	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g XP_022982361.1 259 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 310 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MESLSTLQPQ EMLPNISPKF EDFLGSANHG REATALSLDS IYYNQNDGAD AVSERQHCLN 60 LFKQQEQHIL FGMFQFPAED ANKESHIASH SYEIRHALEQ RIYRMSSQDI EPLSLSMSPR 120 SHSSCVTATM ETKKRGLLGR KKPVHRKSID SFGQRTSQYR GVSRHRWTGR YEAHLWDKSC 180 KKEGQTRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH LNFPLKNYQV EIEEMKNMNR 240 QEYVAHLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FGTQEEAAEA 300 YDIAAIKFRG TNAVTNFDTS RYNVERIMAS SSLFSREIAR RNKEQKLTNA IECKEPTQNI 360 DRIDPSEISN SNNVVWRSAF DDTMLLDRNT TIESIDRKLV TSCGYLNHLM GVETAMVKDS 420 RKFKAHFSNA SVSLPVMSSV WNDV

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MESLSTLQPQ EMLPNISPKF EDFLGSANHG REATALSLDS IYYNQNDGAD AVSERQHCLN  60
LFKQQEQHIL FGMFQFPAED ANKESHIASH SYEIRHALEQ RIYRMSSQDI EPLSLSMSPR  120
SHSSCVTATM ETKKRGLLGR KKPVHRKSID SFGQRTSQYR GVSRHRWTGR YEAHLWDKSC  180
KKEGQTRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH LNFPLKNYQV EIEEMKNMNR  240
QEYVAHLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FGTQEEAAEA  300
YDIAAIKFRG TNAVTNFDTS RYNVERIMAS SSLFSREIAR RNKEQKLTNA IECKEPTQNI  360
DRIDPSEISN SNNVVWRSAF DDTMLLDRNT TIESIDRKLV TSCGYLNHLM GVETAMVKDS  420
RKFKAHFSNA SVSLPVMSSV WNDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-126	AP2 family protein