PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982360.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 476aa MW: 54322.2 Da PI: 9.3765

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	4e-16	189	248	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022982360.1 189 SQYRGVSRHRWTGRYEAHLWDkSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 248 78*****************988886678446***********************98 PP
2	AP2	51.7	2.1e-16	291	342	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g XP_022982360.1 291 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 342 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MSISFLASQH YNGDLLSPLS VMPLKLDGSL CFMESLSTLQ PQEMLPNISP KFEDFLGSAN 60 HGREATALSL DSIYYNQNDG ADAVSERQHC LNLFKQQEQH ILFGMFQFPA EDANKESHIA 120 SHSYEIRHAL EQRIYRMSSQ DIEPLSLSMS PRSHSSCVTA TMETKKRGLL GRKKPVHRKS 180 IDSFGQRTSQ YRGVSRHRWT GRYEAHLWDK SCKKEGQTRK GRQVYLGGYD MEEKAARAYD 240 LAALKYWGPS THLNFPLKNY QVEIEEMKNM NRQEYVAHLR RKSSGFSRGA SIYRGVTRHH 300 QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGTNAVTNFD TSRYNVERIM 360 ASSSLFSREI ARRNKEQKLT NAIECKEPTQ NIDRIDPSEI SNSNNVVWRS AFDDTMLLDR 420 NTTIESIDRK LVTSCGYLNH LMGVETAMVK DSRKFKAHFS NASVSLPVMS SVWNDV

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MSISFLASQH YNGDLLSPLS VMPLKLDGSL CFMESLSTLQ PQEMLPNISP KFEDFLGSAN  60
HGREATALSL DSIYYNQNDG ADAVSERQHC LNLFKQQEQH ILFGMFQFPA EDANKESHIA  120
SHSYEIRHAL EQRIYRMSSQ DIEPLSLSMS PRSHSSCVTA TMETKKRGLL GRKKPVHRKS  180
IDSFGQRTSQ YRGVSRHRWT GRYEAHLWDK SCKKEGQTRK GRQVYLGGYD MEEKAARAYD  240
LAALKYWGPS THLNFPLKNY QVEIEEMKNM NRQEYVAHLR RKSSGFSRGA SIYRGVTRHH  300
QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGTNAVTNFD TSRYNVERIM  360
ASSSLFSREI ARRNKEQKLT NAIECKEPTQ NIDRIDPSEI SNSNNVVWRS AFDDTMLLDR  420
NTTIESIDRK LVTSCGYLNH LMGVETAMVK DSRKFKAHFS NASVSLPVMS SVWNDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-126	AP2 family protein