PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982338.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 263aa MW: 28771.3 Da PI: 7.4047

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	104.6	1.6e-32	77	142	5	70
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaea 70 +sCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstWvpa+krrer+ + a++ k+ +++++a XP_022982338.1 77 VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAA 142 579*********************************************888888877777666554 PP
2	DUF702	84.6	2.5e-26	138	201	92	155
DUF702 92 ssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155 ++ +++ le+ ++P evss+avfrcvr++++d+ ++++aYqtav+igGh+fkGiLyd+G+e++ XP_022982338.1 138 DNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ 201 4455667889999************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MAGFFPLGGG REPNYHLPTT TTTDGLFWYR NYESLGIWQQ QQVQQQAGEG FVYSGDESPP 60 RSSLVMLRSG RNGGGQVISC QDCGNQAKKD CLHMRCRTCC KSRGFDCETH VKSTWVPASK 120 RRERHLRSDA TNLKRPRDNT AASSGLEMGN FPMEVSSTAV FRCVRMTTLD ETNDQFAYQT 180 AVNIGGHTFK GILYDHGPEQ QQQPPPPPNS ASPDGGALLI TAPTTTMELP PISAALLDPP 240 PPYPAPLNTY VAAGTQFFLP PTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	2e-53	SRS family protein