PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982157.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 797aa MW: 89658.8 Da PI: 6.6474

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.4	1.6e-29	552	602	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+le+l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_022982157.1 552 EKSITLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 602 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MLEAPADIAM DFDYMDGLLL DDCWLETADG AVFLHPNLSS FGANLDPLIG WPATEMNGVF 60 NTNLITRSDQ EEPRNMLSNE ASPGQERVDV GQEGCSDQSE NDALEGSELC RRLGMGAGEH 120 MGSAPSVMER LIMAVGYIKD IVRDKDVLVQ VWVPVSRGER SVLITNQLPF SQNSSCTRLA 180 KYRDVSVNYE FTADEDSKKA LGLPGRVFLR KVPEWTPDVR FFRSDEYPRV DHAHEHDVRG 240 TIALPVFEQG SKSCLGVIEV VMVTQQIKYG SEHEILCKAL QAVKLRSSDV ISPPNRKVFN 300 RFNEAVLLEI RDTLRTACET HGLPLAQAWA SCIQESKEGC RHSDENYSCC VSTVDRACFV 360 ADTRIQDFHE ACSEHHLLKG EGIVGMAFKS NKPCFSSDIT SFRNTDYPLS HHAKLFGLHA 420 AVALRLRCIF ISKTDFVLEF FLPVHCRDPE DQRILLSSLS TVIQYSCRNL RLVTDKECRE 480 ENMEQVHPTS SLLASSVQNI QQCSGSVSLF QELNYDLNGV VEDSEECPTV GNGIFADTSM 540 GRTGEKRRNK VEKSITLEVL RQYFAGSLKD AAKSIGVCPT TLKRICRQHG IKRWPSRKIK 600 KVGHSLQKLR LVIDSVNSAS GAFQTSSLYS NLQELASPYV RKMGDGLKTS GDLGDAASKT 660 APSSLSQSSN SSQCFSFCRH PATGCVMQTA KESDQMRVKV SYGEERIRFR VQKWWSYKEL 720 VKEVGRRFNI RDTSKYELKY LDDECEWVLL TSDAYLQDCF HMYKSSPLQT IKLLLHPSPR 780 HKREEPQTPP FPTFYML

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MLEAPADIAM DFDYMDGLLL DDCWLETADG AVFLHPNLSS FGANLDPLIG WPATEMNGVF  60
NTNLITRSDQ EEPRNMLSNE ASPGQERVDV GQEGCSDQSE NDALEGSELC RRLGMGAGEH  120
MGSAPSVMER LIMAVGYIKD IVRDKDVLVQ VWVPVSRGER SVLITNQLPF SQNSSCTRLA  180
KYRDVSVNYE FTADEDSKKA LGLPGRVFLR KVPEWTPDVR FFRSDEYPRV DHAHEHDVRG  240
TIALPVFEQG SKSCLGVIEV VMVTQQIKYG SEHEILCKAL QAVKLRSSDV ISPPNRKVFN  300
RFNEAVLLEI RDTLRTACET HGLPLAQAWA SCIQESKEGC RHSDENYSCC VSTVDRACFV  360
ADTRIQDFHE ACSEHHLLKG EGIVGMAFKS NKPCFSSDIT SFRNTDYPLS HHAKLFGLHA  420
AVALRLRCIF ISKTDFVLEF FLPVHCRDPE DQRILLSSLS TVIQYSCRNL RLVTDKECRE  480
ENMEQVHPTS SLLASSVQNI QQCSGSVSLF QELNYDLNGV VEDSEECPTV GNGIFADTSM  540
GRTGEKRRNK VEKSITLEVL RQYFAGSLKD AAKSIGVCPT TLKRICRQHG IKRWPSRKIK  600
KVGHSLQKLR LVIDSVNSAS GAFQTSSLYS NLQELASPYV RKMGDGLKTS GDLGDAASKT  660
APSSLSQSSN SSQCFSFCRH PATGCVMQTA KESDQMRVKV SYGEERIRFR VQKWWSYKEL  720
VKEVGRRFNI RDTSKYELKY LDDECEWVLL TSDAYLQDCF HMYKSSPLQT IKLLLHPSPR  780
HKREEPQTPP FPTFYML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein