PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981054.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 211aa    MW: 24903.5 Da    PI: 8.4516
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.23.8e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++nrqv +skRrngi+KKA+E+ vLCda+v++++f+s+gk++ey+s
  XP_022981054.1  9 KRIENSTNRQVAYSKRRNGIIKKAKEITVLCDANVSLVVFASSGKMHEYCS 59
                    79***********************************************96 PP
2K-box91.11.9e-30711701100
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y+k+sgk+l++ak+e+l++e++++kke++n+q e+Rhl Ged++sL++keL+ Le++Le++l+ +R+k++e+++++  + +++e+e+++ n++L 
  XP_022981054.1  71 YHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKELMALEEALENGLTGVRDKQSEFMKMMRTNERMMEEENKRLNNELY 165
                     8999******************************************************************************************* PP

           K-box  96 kklee 100
                     +k +e
  XP_022981054.1 166 QKEME 170
                     *9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGRGKIEIKR IENSTNRQVA YSKRRNGIIK KAKEITVLCD ANVSLVVFAS SGKMHEYCSP  60
SMQLVDILDK YHKQSGKRLW DAKHENLSNE MDRVKKENDN MQIELRHLRG EDITSLNYKE  120
LMALEEALEN GLTGVRDKQS EFMKMMRTNE RMMEEENKRL NNELYQKEME AMGECVREMD  180
NGYNQRMRDF NSQMPFAFRV QPIQPNLQER I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.13e-82MIKC_MADS family protein