PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022981046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 237aa MW: 27089 Da PI: 10.0188 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.5 | 6.2e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+EL +LCda+v viifsst klyeyss XP_022981046.1 10 RIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 87.2 | 3.3e-29 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ +++q+e+a L++++++Lq+++R+++Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK+++l+++i+el +k + +++ n++L kk+ XP_022981046.1 81 FSTSEVKYWQKEAAMLRQQLQSLQENHRQMMGEELTGLSIKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHQGNMELYKKV 170 678999*********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELAILCD ADVGVIIFSS TSKLYEYSST 60 SMKTLIERYN KTKEEHHQLG FSTSEVKYWQ KEAAMLRQQL QSLQENHRQM MGEELTGLSI 120 KDLQNLENQL EISLRGVRMK KDQILMDEIQ ELNRKGNLIH QGNMELYKKV NLIRQENLEL 180 YQKVYGTKDA NGASSLTNGL GVGEDAGIPI SLQLSQPQQQ NREAPERATK LGRLQLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 1e-99 | MIKC_MADS family protein |