PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022980995.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | TCP | ||||||||
Protein Properties | Length: 431aa MW: 46720 Da PI: 7.4842 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.3 | 6.5e-35 | 37 | 148 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg..... 88 +g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak++i+el+++++ ++s + ++ ++++s + ++++ XP_022980995.1 37 TGRKDRHSKVCTAKGTRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWNPSTAnasTQRQEQQSLNDENESllsvq 131 79**************************************************************5555533321233333333333333355565 PP TCP 89 ................k 89 + XP_022980995.1 132 rdvfsptgnrrasvvgS 148 55544444443333331 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence |
MGESHRQTTT SSRLGMRTGG GGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GTRDRRVRLS 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KASIDELAEL PAWNPSTANA STQRQEQQSL 120 NDENESLLSV QRDVFSPTGN RRASVVGSHS RVSEFPLQNL QHTQMGGGPN NSTSSFLPPS 180 LDSDSIADTI KSFFPVGTAA AETTSSSIQF QNFPQDLLSR TSSQNQDLRL SLQSFQDPIA 240 IHRHHHAQHQ SQGHQNDHVL FPGTATLSGF DVTTAGWSEH NNLNPAEISR FPRITSWNAS 300 GAETGSSGSS GHGGAAIRSA GYVFNSPHLS TALPPSSLMQ PLFGENQFFS QRGPLQSSNT 360 PSIRAWIDQS LTATDHQQHH MPPSIHQSSY TSLGFASGGF SGFHIPTRIQ GDEEHNGISD 420 KPSSASSDSR H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 1e-71 | TCP family protein |